Molecular and colloidal systems

Replicating systems

Survival of self-replicating molecules under transient compartmentalization with natural selection, G. Laurent, L. Peliti and D. Lacoste, Life 9,78 (2019).
The generality of transient compartmentalization and its associated error threshold, A. Blokhuis, P. Nghe, L. Peliti and D. Lacoste, J. Theor. Bio, 487, 110110 (2020).
Selection strategies for randomly distributed replicators, A. S. Zadorin and Y. Rondelez, PRE 99, 062416 (2019).
Self-replicating colloidal clusters, Z. Zeravcic, M. P. Brenner, PNAS 111, 5 (2014).
Mutation at Expanding Front of Self-Replicating Colloidal Clusters, H. Tanaka, Z. Zeravcic and M. P. Brenner, PRL 117, 23, (2016)

Molecular circuits

Microscopic agents programmed by DNA circuits, G. Gines, A. Zadorin et al., Nature Nanotech 12, 351–359 (2017).
High-resolution mapping of bifurcations in nonlinear biochemical circuits, A. Genot, A. Baccouche, R. Sieskind, et al., Nature Chem 8, 760–767 (2016).
DNA Computing and Molecular Programming, Y. Rondelez and D. Woods, 22nd International Conference, DNA 22, Munich, Germany, September 4-8, 2016.

Directed evolution and diagnostics

The PEN CSR, using external molecular programs to control directed evolution of enzymes, A. Dramé-Maigné, R. Espada, G. MacCallum and Y. Rondelez, Enzyme Engineering XXV, University of Illinois at Urbana-Champaign, ECI Symposium Series, (2019).
Accurate detection of single nucleotide polymorphisms using nanopore sequencing, R. Espada, N. Zarevski, A. Drame-Maigne and Y. Rondelez, bioRxiv (2020).
Emerging isothermal amplification technologies for microRNA biosensing: Applications to liquid biopsies, G. Gines, R. Menezes, W. Xiao, Y. Rondelez and V. Taly, Molecular Aspects of Medicine 72, 100832 (2020).

Principles of self-assembly

Evolutionary optimization of self-assembly in a swarm of bio-micro-robots, N. Aubert-Kato, C. Fosseprez, G. Gines et al., Proceedings of the Genetic and Evolutionary Computation Conference (GECCO ’17). Association for Computing Machinery, New York, NY, USA, 59–66, (2017).
Size limits of self-assembled structures, Z. Zeravcic, V. N. Manoharan, M. P. Brenner, PNAS 111, 45 (2014)
Colloquium: Toward living matter with colloidal particles, Z. Zeravcic, V. N. Manoharan and M. P. Brenner, Rev. Mod. Phys. 89, 3 (2017).

Thermodynamics of hard-spheres

Cavity averages for hard spheres in the presence of polydispersity and incomplete data, M. Schindler and A. C. Maggs. EPJE 38, 97 (2015)
The range and nature of effective interactions in hard-sphere solids, M, Schindler and A. C. Maggs, Soft Matter, 12, 9 (2016).
Sampling eigenmodes in colloidal solids, A. C. Maggs and M. Schindler, EPL 109 (2015).

Hydrodynamics and mechanics of colloidal suspensions

Interrupted Motility Induced Phase Separation in Aligning Active Colloids, M. N. Van der Linden, L. C. Alexander, D. G. A. L. Aarts, and O. Dauchot, Phys. Rev. Lett. 123, 098001 (2019).
Experimental Evidence of the Gardner Phase in a Granular Glass, A. Seguin and O. Dauchot, PRL 117, 228001–5 (2016).

Charged systems: structure, Casimir effect

The conductivity of strong electrolytes from stochastic density functional theory, V. Démery et D. S. Dean, J. Stat. Mech. 023106 (2016)

Olivier DAUCHOT | webpage | Google Scholar |
David LACOSTE | webpage | Google Scholar |
Ludwik LEIBLER | webpage | Google Scholar |
Teresa LOPEZ-LEON | webpage | Google Scholar |
Anthony MAGGS | webpage | Google Scholar |
Joshua MCGRAW | webpage | Google Scholar |
Yannick RONDELEZ | webpage | Google Scholar |
Michael SCHINDLER | webpage | Google Scholar |
Zorana ZERAVCIC | webpage | Google Scholar |